Reverse Dependencies of goatools

The following projects have a declared dependency on goatools:

• diannpy — a package to provide additional report from DIANN's output of proteomics experiment
• dscience — A collection of Python snippets for the Kokel Lab
• funannotate — funannotate: eukaryotic genome annotation pipeline
• genefeast — Gene-centric functional enrichment analysis summarisation tool
• geneinfo — Functions for showing gene information in jupyter notebooks.
• genewalk — Determine gene function based on network embeddings.
• gostrat — Tool to stratify GO terms based on first significant parent
• HogProf — Phylogenetic Profiling with OMA and minhashing
• IPTKL — IPTK is a library specialized in the analysis of HLA-peptidomes identified through an immunopeptidomics pipeline.
• jcvi — Python utility libraries on genome assembly, annotation and comparative genomics
• lifesci — This repo contains python3 life sciences utilities.
• megago — Calculate semantic distance for sets of Gene Ontology terms
• metaquant — Quantitative microbiome analysis
• normalisr — Normalisr Offers Robust Modelling of Associations Linearly In Single-cell RNA-seq
• omadb — Client to the OMA browser, using the REST API.
• onto-vae — Package to preprocess ontologies, train OntoVAE models and obtain pathway activities.
• pocketutils — Adorable little Python code for you to copy or import.
• proteinshake — Protein structure datasets for machine learning.
• proteomics-downstream-analysis — A package for downstream data analysis of proteomics data
• pyclusterprofiler — Tools for analyzing pathway enrichment of gene lists
• pyllars — This package contains supporting utilities for Python 3.
• scib-metrics — Accelerated and Python-only scIB metrics
• sndg-bio — My bioinformatic scripts
• torchcell — An example package