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scdna-replication-tools

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0.0.1 scdna_replication_tools-0.0.1-py3-none-any.whl

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Project: scdna-replication-tools
Version: 0.0.1
Filename: scdna_replication_tools-0.0.1-py3-none-any.whl
Download: [link]
Size: 56718
MD5: 89247af0b06161ced57eeb6c63ce0e4a
SHA256: ac9b98d5b6c75c62e166b50d386d7e13d19828b37ce2dfdf3bc0319c655e599c
Uploaded: 2023-12-19 21:11:10 +0000

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METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt · dependency_links.txt

METADATA

Metadata-Version: 2.1
Name: scdna-replication-tools
Version: 0.0.1
Summary: Code for analyzing single-cell replication dynamics
Author: Adam Weiner (Shah Lab)
Home-Page: https://github.com/shahcompbio/scdna_replication_tools
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License-File: LICENSE
[No description]

WHEEL

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Generator: bdist_wheel (0.38.4)
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Tag: py3-none-any

RECORD

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scdna_replication_tools/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scdna_replication_tools/assign_s_to_clones.py sha256=wRBPpFTE1z5ZbhHto0wnxCD_Df_cNw-AaqgtmyDvMqQ 3764
scdna_replication_tools/binarize_rt_profiles.py sha256=r6Nn5W_KhXGUh15zJghP75JyYf8PcfODgdVLfYEReiE 5796
scdna_replication_tools/bulk_gc_correction.py sha256=MfLG0-vukKI42LmBYF2boTS82jZ_BFxAA7OVWrZy5PA 4087
scdna_replication_tools/calculate_twidth.py sha256=KZ0mtwiQ9jenf-X0-OiBaeU_xQ87ZavYg0O4JzjkxTs 10342
scdna_replication_tools/cncluster.py sha256=IQ-7hCCs9WhskQ5v09rK3JECT7-uNrU4CHZAl-y8QHc 3118
scdna_replication_tools/compute_ccc_features.py sha256=BjACQS5uaR-WyqA-i-2lwNj1ku6c6LRgWFIsUjcPaM0 8683
scdna_replication_tools/compute_consensus_clone_profiles.py sha256=Po7oboIgwlLjS5Dz--M2OxPNO8EeVMMY9VUE6NiSUNM 3624
scdna_replication_tools/compute_pseudobulk_rt_profiles.py sha256=k9bsL6WFmp7eH7wq8QcLIlM0Dak2NCXdCxWG-JcAVRc 3322
scdna_replication_tools/infer_SPF.py sha256=-IwDWjH78cl_fbi1z--96WxznVtKz7GJbxwpGalLRkk 5356
scdna_replication_tools/infer_scRT.py sha256=VzP_RtGHF7vuIE_sVl3M3L9ALEtuIYSutoW73QE7J2c 15528
scdna_replication_tools/normalize_by_cell.py sha256=u3vqAZF4rgfTja7KTHQXHYoZ9OXhQQ-Gu8MGMHhTLxw 12509
scdna_replication_tools/normalize_by_clone.py sha256=7fzqIUcRR4KtwCYcJWX1p43VAITbYyHFyHO2CrWFHMk 3490
scdna_replication_tools/pert_model.py sha256=GKUo5f9nz77GKyfzAyz6adONqhvkRMLh3TqyxUbaZtQ 43775
scdna_replication_tools/pert_simulator.py sha256=dhtcYQXLwkPrAq8MAAZ6QzjyCKc9Ee1S26ZM4__T0D8 18476
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scdna_replication_tools/predict_cycle_phase.py sha256=OIaWOe8rlkhro96Q3hTolS1o7CjxmBXootPd5fkkXkg 6119
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scdna_replication_tools-0.0.1.dist-info/top_level.txt sha256=dboKrEZHA3i2I3v8fSOJE6hUKIs8RNiWlre80IlqIqU 24
scdna_replication_tools-0.0.1.dist-info/RECORD — —

top_level.txt

scdna_replication_tools

entry_points.txt

[console_scripts]
infer_SPF = scdna_replication_tools.infer_SPF:main
infer_scRT = scdna_replication_tools.infer_scRT:main
https://github.com/shahcompbio/cell_cycle_classifier.git@5e08e684bc4725fa56bf68249162e8767041631d#egg=cell_cycle_classifier
https://github.com/mondrian-scwgs/csverve.git@2d6db28dbd4f1867670a5251fd97b98212629c2e#egg=csverve
https://github.com/shahcompbio/scgenome.git@a245b465d7a599af8005f99ba91efeba07e761f5#egg=scgenome
https://github.com/shahcompbio/sisyphus.git@78c708b1dcf93f85e66b5faaafff581e56880c88#egg=sisyphus
https://github.com/amcpherson/wgs_analysis.git@c73a9bd0268b5e6fb55a8c18a58ac28e5f918482#egg=wgs_analysis